PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652303.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 307aa    MW: 34111.7 Da    PI: 8.498
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652303.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.3e-11150197454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  XP_016652303.1 150 SKACREKLRRDRLNDKFLELGSILEPG---RPPKTDKAAILVDAVRMVNQL 197
                     5678**********************8...89***************9999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.294146197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.02E-8149202No hitNo description
Gene3DG3DSA:4.10.280.101.0E-12150219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-9150197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-13151222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-9152203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MTKHTRKTHT TSCHQSPHHH QAHRFPLSLI PSEPTNPQTA TPFNCPLFGS EDITNSQPEN  60
PSFCLFRQRP NMVSPENTNW LFDYGLIDDT PVLDGNFPVS SSGFTWPVQP LAGSSSVSVE  120
IDGSLGDAEG VKESGSKKRV RTESCSGSSS KACREKLRRD RLNDKFLELG SILEPGRPPK  180
TDKAAILVDA VRMVNQLRGE AQKLKDSNSS LQEKIKELKA EKNELRDEKQ RLTLEKEKLE  240
QQLKARNTXX XXXXXXXXXP AAFAAQGQAH GNKLVPFIGY PGVAMWQFMP PASVDTSQDH  300
VLRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894220.0KP689422.1 Prunus pseudocerasus isolate Unigene14053 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008244399.10.0PREDICTED: transcription factor ILR3
SwissprotQ9FH371e-111ILR3_ARATH; Transcription factor ILR3
TrEMBLM5WHW10.0M5WHW1_PRUPE; Uncharacterized protein
STRINGGLYMA06G41620.11e-127(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-92bHLH family protein